.. lpath documentation master file, created by
   sphinx-quickstart on Thu Mar 15 13:55:56 2018.
   You can adapt this file completely to your liking, but it should at least
   contain the root `toctree` directive.

Welcome to LPATH's documentation!
=========================================================

LPATH: Linguistics Pathway Analysis of Trajectories with Hierarchical clustering is a user-friendly, Python tool for clustering pathways from molecular dynamics and weighted ensemble simulations.


.. toctree::
   :maxdepth: 2
   :caption: Contents:

   getting_started
   usage
   api
   errors

Indices and tables
==================

* :ref:`genindex`
* :ref:`modindex`
* :ref:`search`